Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTAGCATTGCAGCTGCAT
.(((((((((((.(((.((.(&).)).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242452
GeneSymbolIRF5
Binding site2228,2248
Score1.0
Seed1
Au0.544
Energy-22.1
Binding len20
Me-5.082
Phylopstem0.14504748181818178
Phylopflank0.01870258250000001
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure