Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTATGCACCCAGCTGGCAT
.((((((((.((.((((((((&)))).)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242452
GeneSymbolIRF5
Binding site1345,1366
Score0.846
Seed1
Au0.382
Energy-21.0
Binding len21
Me-6.325
Phylopstem1.512026
Phylopflank0.3362463718749999
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end8
PositionCDS
2D Structure