Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTATATTTTCAGTAGAGACGAGGTTTTGCCATGTTGGCCAGGC
.((((((..(((..(((((...&.)))))..)))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001242482
GeneSymbolEIF1AD
Binding site2397,2441
Score0.923
Seed1
Au0.485
Energy-18.9
Binding len20
Me-9.309
Phylopstem2.0800671
Phylopflank4.506621794999999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure