Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTATATTTTCAGTAGAGACGAGGTTTTGCCATGTTGGCCAGGC
.((((((..(((..(((((...&.)))))..)))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001242485
GeneSymbolEIF1AD
Binding site2267,2311
Score0.923
Seed1
Au0.485
Energy-18.9
Binding len20
Me-9.309
Phylopstem3.182639333333333
Phylopflank3.45682346
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure