Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGAGACAGCTGCTTTAATACCCAGCTGCT
..(((((((.(((..((((((&.))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242532
GeneSymbolMFSD11
Binding site1318,1352
Score1.0
Seed1
Au0.529
Energy-23.0
Binding len20
Me-7.792
Phylopstem1.816645857142857
Phylopflank2.4005666985000005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure