Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGAGACAGCTGCTTTAATACCCAGCTGCT
..(((((((.(((..((((((&.))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242533
GeneSymbolMFSD11
Binding site1202,1236
Score0.808
Seed1
Au0.529
Energy-23.0
Binding len20
Me-7.792
Phylopstem5.0982828571428565
Phylopflank4.560131324999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure