Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGATGGAGAATAGGGGAGGCTCTCAGCCAGGCTGTCC
.(((((((((((((((((...&.)))))))))....)).)))..))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001242589
GeneSymbolTREM1
Binding site788,827
Score0.885
Seed1
Au0.456
Energy-23.5
Binding len26
Me-3.793
Phylopstem-0.10007487916666669
Phylopflank-0.024668572499999986
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure