Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAACCTGAGTA
.....(((..((((((((((.&))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242589
GeneSymbolTREM1
Binding site853,869
Score0.923
Seed0
Au0.544
Energy-19.4
Binding len16
Me-15.964
Phylopstem-0.15148812
Phylopflank-0.17462438875000003
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure