Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCCGAGCTGCAAC
((((((((.(((..((.....&)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242589
GeneSymbolTREM1
Binding site77,92
Score1.0
Seed1
Au0.574
Energy-17.3
Binding len15
Me-7.14
Phylopstem-0.705972375
Phylopflank-0.15786197224999998
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure