Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCAATTGCTGCAGCTATTGCTGCTGTCAATGCATTGCATGGCAGGTG
(((((.(((.((((((((((..&.)))..))))))).))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001242599
GeneSymbolRBM39
Binding site1703,1751
Score0.846
Seed0
Au0.544
Energy-20.3
Binding len24
Me-7.081
Phylopstem-0.4016773333333333
Phylopflank-0.09447250062500001
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure