Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCAGCAGACTGAAGCTTCAGCTTTAGCTGCAGCTGCC
..(((((((((((..((((((&.))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242599
GeneSymbolRBM39
Binding site1477,1515
Score1.0
Seed1
Au0.5
Energy-24.7
Binding len19
Me-6.549
Phylopstem0.13252463636363634
Phylopflank-0.4254882953750001
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure