Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTCAGCACCTTTTCTAGCAGCTGCC
..((((((((......(((((&.))))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242617
GeneSymbolNXT2
Binding site714,742
Score1.0
Seed1
Au0.559
Energy-21.3
Binding len20
Me-14.243
Phylopstem0.5019696375
Phylopflank0.43023854875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure