Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACAGCTTCAGCAGCAAC
((((.((((.((((((..(((&))))))))).)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242618
GeneSymbolNXT2
Binding site2201,2221
Score0.923
Seed0
Au0.588
Energy-19.0
Binding len20
Me-9.299
Phylopstem0.22213383333333336
Phylopflank0.27839258750000007
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure