Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAACATCTCCAGCGGCTGCAGC
((((((((((((.(((.(((.&))).)))...)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242639
GeneSymbolIL31RA
Binding site4177,4201
Score0.846
Seed1
Au0.368
Energy-23.8
Binding len24
Me-5.227
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure