Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGGTTGCCAGGG
.(((((((..((..........&))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001242640
GeneSymbolBRCC3
Binding site2515,2527
Score1.0
Seed1
Au0.559
Energy-17.2
Binding len12
Me-9.207
Phylopstem0.4676108428571429
Phylopflank0.33608619625
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure