Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGAGCGGCCGCGGCCATGGCGT
.(((.(((((((((((..(((&)))..)))))))))))....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242644
GeneSymbolRAB2A
Binding site281,305
Score0.846
Seed0
Au0.397
Energy-22.6
Binding len24
Me-7.912
Phylopstem1.9765433636363634
Phylopflank2.3602259374999996
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure