Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGATCCAGCACCAGCTGCAGT
(((((((((..((((......&.))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242648
GeneSymbolPHACTR1
Binding site1063,1086
Score0.846
Seed1
Au0.324
Energy-20.7
Binding len17
Me-8.238
Phylopstem3.6431379999999995
Phylopflank2.6465603000000004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure