Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCTGCCAGTGAGCT
..((.((((((((((((((((&))))))))))))).)))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242672
GeneSymbolTTC34
Binding site4406,4428
Score0.923
Seed0
Au0.368
Energy-25.4
Binding len22
Me-9.076
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure