Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGGCTGGAGTTGCAGT
((((((((.(((((....(((&)))..))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242673
GeneSymbolAHCYL1
Binding site1229,1249
Score0.846
Seed1
Au0.441
Energy-18.8
Binding len20
Me-5.962
Phylopstem3.753667875
Phylopflank6.338553249625001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure