Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAACAGCTCAGCTGTT
..(((((((.((((((.((((&))))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242690
GeneSymbolERVMER34-1
Binding site1225,1246
Score0.923
Seed1
Au0.456
Energy-20.8
Binding len21
Me-6.2
Phylopstem-0.060525442857142835
Phylopflank0.43322055625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure