Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTACAATCCAGCAAAAATGCAGA
(((((((((.(((((((.(((&))).))))))))))).....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242729
GeneSymbolARHGEF38
Binding site2068,2094
Score0.923
Seed1
Au0.544
Energy-20.2
Binding len26
Me-5.18
Phylopstem2.636118357142857
Phylopflank3.4754874236249997
Longest consecutive pairings11
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure