Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTAAAGCTGCAGCCAATGCAT
.(((((((((((((.......&.)))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242729
GeneSymbolARHGEF38
Binding site4078,4100
Score1.0
Seed1
Au0.544
Energy-18.3
Binding len18
Me-4.762
Phylopstem3.103117
Phylopflank2.04369833
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end1
Position3UTR
2D Structure