Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAGAGCCTGGACAGTATGAAGGCTCTGACAGCCGCCATCGAAGCTGCAAA
((((((((((((((((.((((&.)).)).))))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242763
GeneSymbolDLGAP1
Binding site987,1040
Score1.0
Seed1
Au0.412
Energy-26.0
Binding len30
Me-3.938
Phylopstem1.0432009636363635
Phylopflank1.0211831374999998
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure