Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAGAGCCTGGACAGTATGAAGGCTCTGACAGCCGCCATCGAAGCTGCAAA
((((((((((((((((.((((&.)).)).))))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242766
GeneSymbolDLGAP1
Binding site967,1020
Score1.0
Seed1
Au0.412
Energy-26.0
Binding len30
Me-3.938
Phylopstem0.5522554272727271
Phylopflank0.9923261550000001
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure