Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTTTGCTGCAGTTGGAGA
((.((((((((((...(((((&)))))...)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242767
GeneSymbolMTHFD1L
Binding site3115,3137
Score1.0
Seed0
Au0.647
Energy-23.1
Binding len22
Me-7.32
Phylopstem0.012932580000000016
Phylopflank1.0516837362500002
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure