Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAACGCCCGCGGCGCGGG
((((.(((((((.(((..(((&)))..))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242767
GeneSymbolMTHFD1L
Binding site314,335
Score1.0
Seed0
Au0.324
Energy-22.8
Binding len21
Me-9.346
Phylopstem-0.2555323428571428
Phylopflank0.41670746625000005
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure