Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTTTGCTGCAGTTGGAGA
((.((((((((((...(((((&)))))...)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242768
GeneSymbolMTHFD1L
Binding site2822,2844
Score1.0
Seed0
Au0.647
Energy-23.1
Binding len22
Me-7.32
Phylopstem0.6590541
Phylopflank0.41121642
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure