Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCTGCTGGTGCAGG
(((((.(.((((((((.....&)))))))).).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242774
GeneSymbolTMEM139
Binding site1446,1463
Score0.846
Seed0
Au0.471
Energy-19.9
Binding len17
Me-8.152
Phylopstem0.6780181124999999
Phylopflank-0.1614780925
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end3
Position3UTR
2D Structure