Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAACTCCTCTTTACTTGCTGTCAGCTGCGGA
(((((((((((((.((((((.&.))))))..)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242784
GeneSymbolHLCS
Binding site2570,2605
Score0.923
Seed1
Au0.485
Energy-24.5
Binding len24
Me-4.794
Phylopstem1.3402129285714286
Phylopflank0.6343358324999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure