Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCCTCAGCTGTGAC
(((((((((.(((..(((((.&)))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242785
GeneSymbolHLCS
Binding site1712,1731
Score1.0
Seed1
Au0.529
Energy-21.1
Binding len19
Me-6.772
Phylopstem1.4914225555555556
Phylopflank0.7117870584999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure