Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTG
((((((((((((((((((((..&.)))))))).)))))............))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001242788
GeneSymbolBRF1
Binding site2511,2560
Score0.846
Seed1
Au0.338
Energy-22.7
Binding len35
Me-3.938
Phylopstem4.513737289090909
Phylopflank4.994749058750001
Longest consecutive pairings8
Position of longest consecutive pairings26
Pairings in 3prime end6
Position3UTR
2D Structure