Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGCGGGTCTCCTCAGCATCAGACGGGCTTCCAGGACCGCAGCAGGCAGG
((((.(((((((((.(.((((&.))))..).)))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242789
GeneSymbolBRF1
Binding site1632,1685
Score0.846
Seed0
Au0.324
Energy-23.5
Binding len25
Me-8.792
Phylopstem0.5226910333333333
Phylopflank2.3423349699999996
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure