Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCAATGGCAGCCAGCAAA
((((.(((((.(((((.(((.&)))))))).)))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242794
GeneSymbolSNAP91
Binding site1409,1430
Score0.846
Seed0
Au0.5
Energy-22.8
Binding len21
Me-10.881
Phylopstem5.827362000000001
Phylopflank4.223906625000001
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure