Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGCAGCACCAGCAC
.(((.(((((((((((.....&)))))))))))....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242794
GeneSymbolSNAP91
Binding site1136,1155
Score0.846
Seed0
Au0.338
Energy-22.4
Binding len19
Me-7.912
Phylopstem3.536744027272727
Phylopflank2.668411036
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure