Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCAACTTCAGCAGTTAAAGCAAG
((((((((((((((((.(((.&)))))))))...))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242805
GeneSymbolBRDT
Binding site1075,1101
Score1.0
Seed1
Au0.632
Energy-18.9
Binding len26
Me-3.938
Phylopstem1.1115343454545454
Phylopflank2.1454087799999995
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
PositionCDS
2D Structure