Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAACACGCACACTCATCTTTTCTTGCATTACTGCTGA
...(((((((((((((((((.&))))))))).)))).......................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242811
GeneSymbolANKRD6
Binding site128,170
Score0.923
Seed0
Au0.618
Energy-21.5
Binding len42
Me-6.515
Phylopstem-0.1340659292682927
Phylopflank0.18178030875000006
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end7
Position5UTR
2D Structure