Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAGGATGCGGCTGCAC
.(((((((((.(((.(.((((&)))).).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242820
GeneSymbolDEF8
Binding site2195,2215
Score0.897
Seed1
Au0.397
Energy-22.3
Binding len20
Me-7.354
Phylopstem-0.1132912444444444
Phylopflank-0.38286138875000003
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure