Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACCCGCCGGGGACAGATCTGCT
..((((((.((((.((((((.&))))))..)))).))......)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242824
GeneSymbolFDPS
Binding site448,474
Score0.923
Seed1
Au0.426
Energy-19.4
Binding len26
Me-6.87
Phylopstem2.8467593333333334
Phylopflank4.251010246250001
Longest consecutive pairings6
Position of longest consecutive pairings20
Pairings in 3prime end6
PositionCDS
2D Structure