Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCTACCTTCCTATAGCTGCAGCCATGTAC
.((((((((((((((((((((&.))))...))))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242825
GeneSymbolFDPS
Binding site572,604
Score0.885
Seed1
Au0.515
Energy-22.8
Binding len27
Me-3.793
Phylopstem2.83999024
Phylopflank2.4180283
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end8
PositionCDS
2D Structure