Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACCCGCCGGGGACAGATCTGCT
..((((((.((((.((((((.&))))))..)))).))......)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242825
GeneSymbolFDPS
Binding site285,311
Score0.923
Seed1
Au0.426
Energy-19.4
Binding len26
Me-6.87
Phylopstem3.646551666666667
Phylopflank2.6755245950000015
Longest consecutive pairings6
Position of longest consecutive pairings20
Pairings in 3prime end6
PositionCDS
2D Structure