Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGAGCTGTATAGCTGGGT
.(.(((((((((((.(((((.&))))).))))))..))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242826
GeneSymbolRNF41
Binding site2600,2622
Score1.0
Seed0
Au0.529
Energy-21.0
Binding len22
Me-6.086
Phylopstem0.6460713846153846
Phylopflank0.23733098875000003
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end6
Position3UTR
2D Structure