Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCCCGCCGCAGTTGCGT
.((((((((((((........&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242829
GeneSymbolIP6K1
Binding site4711,4730
Score0.923
Seed1
Au0.265
Energy-21.9
Binding len14
Me-5.619
Phylopstem0.28780981666666666
Phylopflank0.031685038750000026
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure