Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGAGAGAAAAGACTGCGAGGTGGCCGCAGCTGTG
..((((((((((((.......&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242849
GeneSymbolRNF146
Binding site16,53
Score0.923
Seed1
Au0.324
Energy-22.9
Binding len14
Me-5.925
Phylopstem-0.9632955083333332
Phylopflank-0.7604654530357142
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure