Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAGCTAGAGCTGCAGA
((((((((..((((.(.((((&))))).))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242856
GeneSymbolARFIP2
Binding site250,271
Score0.846
Seed1
Au0.412
Energy-21.0
Binding len21
Me-6.972
Phylopstem1.2983149500000002
Phylopflank1.4111152875000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure