Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCTACGGAACCTGCTGCAGG
(((((((...((((.((((((&)))))....).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242858
GeneSymbolPRKACB
Binding site874,898
Score0.846
Seed1
Au0.544
Energy-18.1
Binding len24
Me-9.286
Phylopstem6.238965385714286
Phylopflank6.012600198750002
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure