Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCTACGGAACCTGCTGCAGG
(((((((...((((.((((((&)))))....).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242860
GeneSymbolPRKACB
Binding site1133,1157
Score0.846
Seed1
Au0.544
Energy-18.1
Binding len24
Me-9.286
Phylopstem6.953060428571429
Phylopflank5.551474006250002
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure