Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACATTGCTGTCAGGTG
((((((((..((((((......&)))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001242862
GeneSymbolPRKACB
Binding site2412,2428
Score1.0
Seed1
Au0.647
Energy-17.5
Binding len16
Me-6.236
Phylopstem1.91291375
Phylopflank2.1334543229999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure