Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTATGCACTACTGTAGCTAGGAAA
((.(((((((((((((((((.&))).))))..))))))))).).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242862
GeneSymbolPRKACB
Binding site4137,4162
Score0.923
Seed0
Au0.691
Energy-18.5
Binding len25
Me-5.495
Phylopstem1.564932323809524
Phylopflank2.0452631637499996
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure