Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCTACGGAACCTGCTGCAGG
(((((((...((((.((((((&)))))....).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242862
GeneSymbolPRKACB
Binding site786,810
Score0.846
Seed1
Au0.544
Energy-18.1
Binding len24
Me-9.286
Phylopstem4.697278428571429
Phylopflank5.892330370625001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure