Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAACAAAGCTGCAGCTTCTGGGATAATGGGTCGCAGT
((((((((((((((((..(((&)))..)))..)))))))))................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242869
GeneSymbolSLAIN1
Binding site847,887
Score0.923
Seed1
Au0.485
Energy-19.8
Binding len40
Me-3.938
Phylopstem1.6195420294117644
Phylopflank3.2884212892500013
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end6
PositionCDS
2D Structure